voussoirkit/voussoirkit/worms.py

849 lines
31 KiB
Python

'''
Worms is an SQL ORM with the strength and resilience of the humble earthworm.
'''
import abc
import functools
import random
import re
import sqlite3
import threading
import typing
from voussoirkit import pathclass
from voussoirkit import sqlhelpers
from voussoirkit import vlogging
log = vlogging.getLogger(__name__, 'worms')
RNG = random.SystemRandom()
class WormException(Exception):
pass
class BadTable(WormException):
pass
class NoTransaction(WormException):
pass
class TransactionActive(WormException):
pass
class DeletedObject(WormException):
'''
For when thing.deleted == True.
'''
pass
# snake-cased because I want the ergonomics of a function from the caller's end.
class raise_without_rollback:
def __init__(self, exc):
self.exc = exc
def slice_before(li, item):
index = li.index(item)
return li[:index]
def atomic(method):
'''
This decorator can be added to functions that modify your worms database.
A savepoint is opened, then your function is run. If an exception is raised,
we roll back to the savepoint.
This decorator adds the attribute 'is_worms_atomic = True' to your
function. You can use this to distinguish readonly vs writing methods during
runtime.
If you want to raise an exception without rolling back, you can return
worms.raise_without_rollback(exc). This could be useful if you want to
preserve some kind of attempted action in the database while still raising
the action's failure.
'''
@functools.wraps(method)
def wrapped_atomic(self, *args, **kwargs):
if isinstance(self, Object):
self.assert_not_deleted()
database = self._worms_database
is_root = len(database.savepoints) == 0
savepoint_id = database.savepoint(message=method.__qualname__)
log.loud(f'{method.__qualname__} got savepoint {savepoint_id}.')
try:
result = method(self, *args, **kwargs)
except BaseException as exc:
log.debug(f'{method} raised {repr(exc)}.')
database.rollback(savepoint=savepoint_id)
raise
if isinstance(result, raise_without_rollback):
raise result.exc from result.exc
if not is_root:
# In order to prevent a huge pile-up of savepoints when a
# @transaction calls another @transaction many times, the sub-call
# savepoints are removed from the stack. When an exception occurs,
# we're going to rollback from the rootmost savepoint anyway, we'll
# never rollback one sub-transaction.
database.release_savepoint(savepoint=savepoint_id)
return result
wrapped_atomic.is_worms_atomic = True
return wrapped_atomic
class TransactionContextManager:
def __init__(self, database):
self.database = database
def __enter__(self):
log.loud('Entering transaction.')
self.database.begin(transaction_mode='IMMEDIATE')
return self
def __exit__(self, exc_type, exc_value, exc_traceback):
log.loud('Exiting transaction.')
if exc_type is not None:
log.loud(f'Transaction raised {exc_type}.')
self.database.rollback()
raise exc_value
self.database.commit()
class Database(metaclass=abc.ABCMeta):
'''
When your class subclasses this class, you need to ensure the following:
- self.COLUMNS is a dictionary of {table: [columns]} like what comes out of
sqlhelpers.extract_table_column_map.
- self.COLUMN_INDEX is a dictionary of {table: {column: index}} like what
comes out of sqlhelpers.reverse_table_column_map.
'''
def __init__(self):
super().__init__()
# Used for @atomic decorator
self._worms_database = self
self.on_commit_queue = []
self.on_rollback_queue = []
self.savepoints = []
# To prevent two transactions from running at the same time in different
# threads, and committing the database in an odd state, we lock out and
# run one transaction at a time.
self._worms_transaction_lock = threading.Lock()
self._worms_transaction_owner = None
self.transaction = TransactionContextManager(database=self)
# Since user input usually comes in the form of strings -- from command
# line, http requests -- and the IDs are usually ints in the database,
# we'll do the data conversion before making queries or responses,
# so you don't have to do it in your application.
# But if your application uses string IDs, set self.id_type = str
self.id_type = int
self.last_commit_id = None
@abc.abstractmethod
def _init_column_index(self):
'''
Your subclass needs to set self.COLUMNS and self.COLUMN_INDEX, where
COLUMNS is a dictionary of {'table': ['column1', 'column2', ...]} and
COLUMN_INDEX is a dict of {'table': {'column1': 0, 'column2': 1}}.
These outputs can come from sqlhelpers.extract_table_column_map and
reverse_table_column_map.
'''
raise NotImplementedError
@abc.abstractmethod
def _init_sql(self):
'''
Your subclass needs to prepare self.sql_read and self.sql_write, which
are both connection objects. They can be the same object if you want, or
they can be separate connections so that the readers can not get blocked
by the writers.
You can do it yourself or use the provided _init_connections to get the
basic handles going. Then use the rest of this method to do any other
setup your application needs.
'''
raise NotImplementedError
def _make_sqlite_read_connection(self, path):
'''
Provided for convenience of _init_sql.
'''
if isinstance(path, pathclass.Path):
path = path.absolute_path
if path == ':memory:':
sql_read = sqlite3.connect('file:memdb1?mode=memory&cache=shared&mode=ro', uri=True)
sql_read.row_factory = sqlite3.Row
else:
log.debug('Connecting to sqlite file "%s".', path)
sql_read = sqlite3.connect(f'file:{path}?mode=ro', uri=True)
sql_read.row_factory = sqlite3.Row
return sql_read
def _make_sqlite_write_connection(self, path):
if isinstance(path, pathclass.Path):
path = path.absolute_path
if path == ':memory:':
sql_write = sqlite3.connect('file:memdb1?mode=memory&cache=shared', uri=True)
sql_write.row_factory = sqlite3.Row
else:
log.debug('Connecting to sqlite file "%s".', path)
sql_write = sqlite3.connect(path)
sql_write.row_factory = sqlite3.Row
return sql_write
def assert_no_transaction(self) -> None:
thread_id = threading.current_thread().ident
if self._worms_transaction_owner == thread_id:
raise TransactionActive()
def assert_transaction_active(self) -> None:
thread_id = threading.current_thread().ident
if self._worms_transaction_owner != thread_id:
raise NoTransaction()
def acquire_transaction_lock(self):
'''
If no transaction is running, the caller gets the lock.
If a transaction is running on the same thread as the caller, the caller
does not get the lock but the function returns so it can do its work,
since it is a descendant of the original transaction call.
If a transaction is running and the caller is on a different thread, it
gets blocked until the previous transaction finishes.
'''
# Don't worry about race conditions, ownership of lock changing while
# the if statement is evaluating, because this individual thread cannot
# be checking its identity and releasing the lock at the same time! If
# transaction_owner is the current thread, we know that will remain
# true until this thread releases it, which can't happen at the same
# time here.
thread_id = threading.current_thread().ident
if self._worms_transaction_owner == thread_id:
return False
log.loud(f'{thread_id} wants the transaction lock.')
self._worms_transaction_lock.acquire()
log.loud(f'{thread_id} has the transaction lock.')
self._worms_transaction_owner = thread_id
return True
def assert_table_exists(self, table) -> None:
if table not in self.COLUMN_INDEX:
raise BadTable(f'Table {table} does not exist.')
def begin(self, transaction_mode='DEFERRED'):
if transaction_mode not in {'DEFERRED', 'IMMEDIATE', 'EXCLUSIVE'}:
raise ValueError(transaction_mode)
self.acquire_transaction_lock()
self.execute(f'BEGIN {transaction_mode}')
def close(self):
# Wrapped in hasattr because if the object fails __init__, Python will
# still call __del__ and thus close(), even though the attributes
# we're trying to clean up never got set.
if not hasattr(self, 'sql_read'):
return
if self._worms_transaction_owner:
self.rollback()
log.loud('Closing sql_read.')
self.sql_read.close()
del self.sql_read
log.loud('Closing sql_write.')
self.sql_write.close()
del self.sql_write
def commit(self, message=None) -> None:
if message is None:
log.debug('Committing.')
else:
log.debug('Committing - %s.', message)
while len(self.on_commit_queue) > 0:
task = self.on_commit_queue.pop(-1)
if isinstance(task, int):
# savepoints.
continue
args = task.get('args', [])
kwargs = task.get('kwargs', {})
action = task['action']
log.loud(f'{action} {args} {kwargs}')
try:
action(*args, **kwargs)
except Exception as exc:
log.debug(f'{action} raised {repr(exc)}.')
self.rollback()
raise
self.savepoints.clear()
self.sql_write.commit()
self.last_commit_id = RNG.getrandbits(32)
self.release_transaction_lock()
def delete(self, table, pairs) -> sqlite3.Cursor:
if isinstance(table, type) and issubclass(table, Object):
table = table.table
self.assert_table_exists(table)
(qmarks, bindings) = sqlhelpers.delete_filler(pairs)
query = f'DELETE FROM {table} {qmarks}'
return self.execute(query, bindings)
def execute_read(self, query, bindings=[]):
if bindings is None:
bindings = []
thread_id = threading.current_thread().ident
if self._worms_transaction_owner == thread_id:
sql = self.sql_write
else:
sql = self.sql_read
cur = sql.cursor()
log.loud('%s %s', query, bindings)
cur.execute(query, bindings)
return cur
def execute(self, query, bindings=[]):
self.assert_transaction_active()
if bindings is None:
bindings = []
cur = self.sql_write.cursor()
log.loud('%s %s', query, bindings)
cur.execute(query, bindings)
return cur
def executescript(self, script) -> None:
'''
The problem with Python's default executescript is that it executes a
COMMIT before running your script. If I wanted a commit I'd write one!
'''
self.assert_transaction_active()
lines = re.split(r';(:?\n|$)', script)
lines = (line.strip() for line in lines)
lines = (line for line in lines if line)
cur = self.sql_write.cursor()
for line in lines:
log.loud(line)
cur.execute(line)
def exists(self, query, bindings=None) -> bool:
'''
query should be a SELECT query.
Returns True if at least one row was found, False if no rows found.
'''
row = self.select_one(query, bindings)
return (row is not None)
def explain(self, query, bindings=None) -> str:
exp = self.execute_read('EXPLAIN QUERY PLAN ' + query, bindings)
return '\n'.join(str(tuple(x)) for x in exp.fetchall())
def get_object_by_id(self, object_class, object_id):
'''
Select an object by its ID.
'''
if isinstance(object_id, object_class):
object_id = object_id.id
object_id = self.normalize_object_id(object_class, object_id)
query = f'SELECT * FROM {object_class.table} WHERE id == ?'
bindings = [object_id]
object_row = self.select_one(query, bindings)
if object_row is None:
raise object_class.no_such_exception(object_id)
instance = object_class(self, object_row)
return instance
def get_objects(self, object_class):
'''
Yield objects, unfiltered, in whatever order they appear in the database.
'''
table = object_class.table
query = f'SELECT * FROM {table}'
objects = self.select(query)
for object_row in objects:
instance = object_class(self, object_row)
yield instance
def get_objects_by_id(self, object_class, object_ids, *, raise_for_missing=False):
'''
Select many objects by their IDs.
This is better than calling get_object_by_id in a loop because we can
use a single SQL select to get batches of up to 999 items.
Note: The order of the output will most likely not match the order of
the input. Consider using get_objects_by_sql if that is a necessity.
raise_for_missing:
If any of the requested object ids are not found in the database,
we can raise that class's no_such_exception with the set of missing
IDs.
'''
(object_ids, missing) = self.normalize_object_ids(object_ids)
ids_needed = list(object_ids)
ids_found = set()
while ids_needed:
# SQLite3 has a limit of 999 ? in a query, so we must batch them.
id_batch = ids_needed[:999]
ids_needed = ids_needed[999:]
qmarks = ','.join('?' * len(id_batch))
qmarks = f'({qmarks})'
query = f'SELECT * FROM {object_class.table} WHERE id IN {qmarks}'
for object_row in self.select(query, id_batch):
instance = object_class(self, db_row=object_row)
ids_found.add(instance.id)
yield instance
if raise_for_missing:
missing.update(object_ids.difference(ids_found))
if missing:
raise object_class.no_such_exception(missing)
def get_objects_by_sql(self, object_class, query, bindings=None):
'''
Use an arbitrary SQL query to select objects from the database.
Your query should select * from the object's table.
'''
object_rows = self.select(query, bindings)
for object_row in object_rows:
yield object_class(self, object_row)
def get_tables(self) -> set[str]:
'''
Return the set of all table names in the database.
'''
query = 'SELECT name FROM sqlite_master WHERE type = "table"'
tables = set(self.select_column(query))
return tables
def insert(self, table, pairs) -> sqlite3.Cursor:
if isinstance(table, type) and issubclass(table, Object):
table = table.table
self.assert_table_exists(table)
(qmarks, bindings) = sqlhelpers.insert_filler(pairs)
query = f'INSERT INTO {table} {qmarks}'
return self.execute(query, bindings)
def normalize_object_id(self, object_class, object_id):
'''
Given an object ID as input by the user, try to convert it using
self.id_type. If that raises a ValueError, then we raise
that class's no_such_exception.
Just because an ID passes the type conversion does not mean that ID
actually exists. We can raise the no_such_exception because an invalid
ID certainly doesn't exist, but a valid one still might not exist.
'''
try:
return self.id_type(object_id)
except ValueError:
raise object_class.no_such_exception(object_id)
def normalize_object_ids(self, object_ids):
'''
Given a list of object ids, return two sets: the first set contains all
the IDs that were able to be normalized using self.id_type; the second
contains all the IDs that raised ValueError. This method does not raise
the no_such_exception. as you may prefer to process the good instead of
losing it all with an exception.
Just because an ID passes the type conversion does not mean that ID
actually exists.
'''
good = set()
bad = set()
for object_id in object_ids:
try:
good.add(self.id_type(object_id))
except ValueError:
bad.add(object_id)
return (good, bad)
def pragma_read(self, key):
pragma = self.execute_read(f'PRAGMA {key}').fetchone()
if pragma is not None:
return pragma[0]
return None
def pragma_write(self, key, value) -> None:
# We are bypassing self.execute because some pragmas are not allowed to
# happen during transactions.
return self.sql_write.cursor().execute(f'PRAGMA {key} = {value}')
def release_savepoint(self, savepoint, allow_commit=False) -> None:
'''
Releasing a savepoint removes that savepoint from the timeline, so that
you can no longer roll back to it. Then your choices are to commit
everything, or roll back to a previous point. If you release the
earliest savepoint, the database will commit.
'''
if savepoint not in self.savepoints:
log.warn('Tried to release nonexistent savepoint %s.', savepoint)
return
is_commit = savepoint == self.savepoints[0]
if is_commit and not allow_commit:
log.debug('Not committing %s without allow_commit=True.', savepoint)
return
if is_commit:
# We want to perform the on_commit_queue so let's use our commit
# method instead of allowing sql's release to commit.
self.commit()
else:
self.execute(f'RELEASE "{savepoint}"')
self.savepoints = slice_before(self.savepoints, savepoint)
def release_transaction_lock(self):
thread_id = threading.current_thread().ident
if not self._worms_transaction_lock.locked():
return
if self._worms_transaction_owner != thread_id:
log.warning(f'{thread_id} tried to release the transaction lock without holding it.')
return
log.loud(f'{thread_id} releases the transaction lock.')
self._worms_transaction_owner = None
self._worms_transaction_lock.release()
def rollback(self, savepoint=None) -> None:
'''
Given a savepoint, roll the database back to the moment before that
savepoint was created. Keep in mind that a @transaction savepoint is
always created *before* the method actually does anything.
If no savepoint is provided then rollback the entire transaction.
'''
if savepoint is not None and savepoint not in self.savepoints:
log.warn('Tried to restore nonexistent savepoint %s.', savepoint)
return
while len(self.on_rollback_queue) > 0:
task = self.on_rollback_queue.pop(-1)
if task == savepoint:
break
if isinstance(task, int):
# Intermediate savepoints.
continue
args = task.get('args', [])
kwargs = task.get('kwargs', {})
task['action'](*args, **kwargs)
if savepoint is not None:
log.debug('Rolling back to %s.', savepoint)
self.execute(f'ROLLBACK TO "{savepoint}"')
self.savepoints = slice_before(self.savepoints, savepoint)
self.on_commit_queue = slice_before(self.on_commit_queue, savepoint)
else:
log.debug('Rolling back.')
self.execute('ROLLBACK')
self.savepoints.clear()
self.on_commit_queue.clear()
self.release_transaction_lock()
def savepoint(self, message=None) -> int:
savepoint_id = RNG.getrandbits(32)
if message:
log.log(5, 'Savepoint %s for %s.', savepoint_id, message)
else:
log.log(5, 'Savepoint %s.', savepoint_id)
query = f'SAVEPOINT "{savepoint_id}"'
self.execute(query)
self.savepoints.append(savepoint_id)
self.on_commit_queue.append(savepoint_id)
self.on_rollback_queue.append(savepoint_id)
return savepoint_id
def select(self, query, bindings=None) -> typing.Iterable:
cur = self.execute_read(query, bindings)
while True:
fetch = cur.fetchone()
if fetch is None:
break
yield fetch
def select_column(self, query, bindings=None) -> typing.Iterable:
'''
If your SELECT query only selects a single column, you can use this
function to get a generator of the individual values instead
of one-tuples.
'''
for row in self.select(query, bindings):
yield row[0]
def select_one(self, query, bindings=None):
'''
Select a single row, or None if no rows match your query.
'''
cur = self.execute_read(query, bindings)
return cur.fetchone()
def select_one_value(self, query, bindings=None, fallback=None):
'''
Select a single column out of a single row, or fallback if no rows match
your query. The fallback can help you distinguish between rows that
don't exist and a null value.
'''
cur = self.execute_read(query, bindings)
row = cur.fetchone()
if row:
return row[0]
else:
return fallback
def update(self, table, pairs, where_key) -> sqlite3.Cursor:
if isinstance(table, type) and issubclass(table, Object):
table = table.table
self.assert_table_exists(table)
(qmarks, bindings) = sqlhelpers.update_filler(pairs, where_key=where_key)
query = f'UPDATE {table} {qmarks}'
return self.execute(query, bindings)
class DatabaseWithCaching(Database, metaclass=abc.ABCMeta):
def __init__(self):
super().__init__()
self.caches = {}
def _init_caches(self):
'''
Your subclass needs to set self.caches, which is a dictionary of
{object: cache} where object is one of your data object types
(use the class itself as the key) and cache is a dictionary or
cacheclass.Cache or anything that supports subscripting.
If any types are omitted from this dictionary, objects of those
types will not be cached.
'''
raise NotImplementedError
def clear_all_caches(self) -> None:
for cache in self.caches:
cache.clear()
def get_cached_instance(self, object_class, db_row):
'''
Check if there is already an instance in the cache and return that.
Otherwise, a new instance is created, cached, and returned.
Note that in order to call this method you have to already have a
db_row which means performing some select. If you only have the ID,
use get_object_by_id, as there may already be a cached instance to save
you the select.
'''
object_table = object_class.table
object_cache = self.caches.get(object_class, None)
if isinstance(db_row, (dict, sqlite3.Row)):
object_id = db_row['id']
else:
object_index = self.COLUMN_INDEX[object_table]
object_id = db_row[object_index['id']]
if object_cache is None:
return object_class(self, db_row)
try:
instance = object_cache[object_id]
except KeyError:
log.loud('Cache miss %s %s.', object_class, object_id)
instance = object_class(self, db_row)
object_cache[object_id] = instance
return instance
def get_object_by_id(self, object_class, object_id):
'''
This method will first check the cache to see if there is already an
instance with that ID, in which case we don't need to perform any SQL
select. If it is not in the cache, then a new instance is created,
cached, and returned.
'''
if isinstance(object_id, object_class):
# This could be used to check if your old reference to an object is
# still in the cache, or re-select it from the db to make sure it
# still exists and re-cache.
# Probably an uncommon need but... no harm I think.
object_id = object_id.id
object_id = self.normalize_object_id(object_class, object_id)
object_cache = self.caches.get(object_class, None)
if object_cache is not None:
try:
return object_cache[object_id]
except KeyError:
pass
query = f'SELECT * FROM {object_class.table} WHERE id == ?'
bindings = [object_id]
object_row = self.select_one(query, bindings)
if object_row is None:
raise object_class.no_such_exception(object_id)
# Normally we would call `get_cached_instance` instead of
# constructing here. But we already know for a fact that this
# object is not in the cache.
instance = object_class(self, object_row)
if object_cache is not None:
object_cache[instance.id] = instance
return instance
def get_objects(self, object_class):
'''
Yield objects, unfiltered, in whatever order they appear in the database.
'''
table = object_class.table
query = f'SELECT * FROM {table}'
objects = self.select(query)
for object_row in objects:
instance = self.get_cached_instance(object_class, object_row)
yield instance
def get_objects_by_id(self, object_class, object_ids, *, raise_for_missing=False):
'''
Given multiple IDs, this method will find which ones are in the cache
and which ones need to be selected from the db.
This is better than calling get_object_by_id in a loop because we can
use a single SQL select to get batches of up to 999 items.
Note: The order of the output will most likely not match the order of
the input, because we first pull items from the cache before requesting
the rest from the database.
raise_for_missing:
If any of the requested object ids are not found in the database,
we can raise that class's no_such_exception with the set of missing
IDs.
'''
object_cache = self.caches.get(object_class, None)
(object_ids, missing) = self.normalize_object_ids(object_ids)
ids_needed = set()
ids_found = set()
if object_cache is None:
ids_needed.update(object_ids)
else:
for object_id in object_ids:
try:
instance = object_cache[object_id]
except KeyError:
ids_needed.add(object_id)
else:
ids_found.add(object_id)
yield instance
if not ids_needed:
return
if object_cache is not None:
log.loud('Cache miss %s %s.', object_class.table, ids_needed)
ids_needed = list(ids_needed)
while ids_needed:
# SQLite3 has a limit of 999 ? in a query, so we must batch them.
id_batch = ids_needed[:999]
ids_needed = ids_needed[999:]
qmarks = ','.join('?' * len(id_batch))
qmarks = f'({qmarks})'
query = f'SELECT * FROM {object_class.table} WHERE id IN {qmarks}'
for object_row in self.select(query, id_batch):
# Normally we would call `get_cached_instance` instead of
# constructing here. But we already know for a fact that this
# object is not in the cache because it made it past the
# previous loop.
instance = object_class(self, db_row=object_row)
if object_cache is not None:
object_cache[instance.id] = instance
ids_found.add(instance.id)
yield instance
if raise_for_missing:
missing.update(object_ids.difference(ids_found))
if missing:
raise object_class.no_such_exception(missing)
def get_objects_by_sql(self, object_class, query, bindings=None):
'''
Use an arbitrary SQL query to select objects from the database.
Your query should select * from the object's table.
'''
object_rows = self.select(query, bindings)
for object_row in object_rows:
yield self.get_cached_instance(object_class, object_row)
class Object(metaclass=abc.ABCMeta):
'''
When your objects subclass this class, you need to ensure the following:
- self.table should be a string.
- self.no_such_exception should be an exception class, to be raised when
the user requests an instance of this class that does not exist.
Initialized with a single argument, the requested ID.
'''
def __init__(self, database):
'''
Your subclass should call super().__init__(database).
'''
# Used for transaction
self._worms_database = database
self.deleted = False
def __reinit__(self):
'''
Reload the row from the database and do __init__ with it.
'''
query = f'SELECT * FROM {self.table} WHERE id == ?'
bindings = [self.id]
row = self._worms_database.select_one(query, bindings)
if row is None:
self.deleted = True
else:
self.__init__(self._worms_database, row)
def __eq__(self, other):
return (
isinstance(other, type(self)) and
self._worms_database == other._worms_database and
self.id == other.id
)
def __format__(self, formcode):
if formcode == 'r':
return repr(self)
else:
return str(self)
def __hash__(self):
return hash(f'{self.table}.{self.id}')
def assert_not_deleted(self) -> None:
'''
Raises DeletedObject if this object is deleted.
You need to set self.deleted during any method that deletes the object
from the database.
'''
if self.deleted:
raise DeletedObject(self)